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@EMC-Viroscience

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  1. EMC-Viroscience/EMC-Viroscience.github.io EMC-Viroscience/EMC-Viroscience.github.io Public

    Repo for the EMC-Viroscience Quarto website

    Python 1

  2. EMC-Viroscience/illumina-metagenomic-analysis-manual EMC-Viroscience/illumina-metagenomic-analysis-manual Public

    This is a manual for viral metagenomic data analysis of Illumina short reads

    Python 1

  3. EMC-Viroscience/nanopore-amplicon-analysis-manual EMC-Viroscience/nanopore-amplicon-analysis-manual Public

    This is a manual for viral amplicon data analysis of Nanopore long reads

    Python 1

  4. VirBench VirBench Public

    VirBench (Viral Assembly Benchmark) is a pipeline made to compare metagenomic assemblers with viral nanopore reads.

    Python

  5. EMC-Viroscience/bird-surveillance-dashboard EMC-Viroscience/bird-surveillance-dashboard Public

    Source code for the bird surveillance dashboard based on the Pathogen Portal data.

    1

  6. nextstrain-share nextstrain-share Public

    Share NextStrain results